ClonMapper
Detailed instructions for generating and deploying the ClonMapper DNA barcoding system.
Featured in: Lineage Tracing Reveals Clone-Specific Responses to Doxorubicin in Triple-Negative Breast Cancer Morgan, D., Gardner, A.L., Brock, A. (2025) Access Online Mapping cell-cell fusion at single-cell resolution Gardner, A. L., Zheng, L., Howland, K., Saunders, A., Ramirez, A., Parker, P., Iloegbunam, C., Morgan, D., Jost, T. A., & Brock, A. (2025) Access Online Cell Barcoding Reveals Lineage-dependent Outcomes in hiPSC Cardiac Differentiation Sohn, S., Morgan, D., Callahan, C., Dockery, K., Brock, A., & Zoldan, J. (2025) Access Online |
Pycashier
Tool for extracting and processing DNA barcode tags from Illumina sequencing. Default parameters are designed for use by the Brock lab to process data generated from ClonMapper lineage tracing experiments, but is extensible to other similarly designed tools.
ClusterCleaver
ClusterCleaver is a computational package that uses metrics of statistical distance to identify candidate surface markers maximally unique to transcriptomic subpopulations in scRNA-seq which may be used for FACS isolation.
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